Health Data Science Sandbox
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A resource for biomedical students and researchers. Includes proteomics software tools like FragPipe, MaxQuant, PDV, SearchGUI, ThermoRawFileParser, and PeptideShaker. Offers a user-friendly interface, automated identification and quantification, comprehensive data analysis, and lightweight clone feature for optimized storage.
Contributors
Jacob Fredegaard Hansen Jacob Fredegaard Hansen
Lev Levitsky Lev Levitsky
phusen phusen
Samuele Soraggi Samuele Soraggi
Veit Schwämmle Veit Schwämmle
Proteomics
Days since last push
352
License
cc-by-sa-4.0
Repository for bulk RNAseq course of the Danish Health Data Science Sandbox project.
Contributors
Jose Alejandro Romero Herrera Jose Alejandro Romero Herrera
Alba Refoyo Martínez Alba Refoyo Martínez
Henrike Zschach Henrike Zschach
Samuele Soraggi Samuele Soraggi
Adrija Kalvisa Adrija Kalvisa
+ 1 more
Transcriptomics RNA-seq Next generation sequencing R
Days since last push
42
License
cc-by-sa-4.0
Repository for single cell RNAseq course of the Danish Health Data Science Sandbox project.
Contributors
Samuele Soraggi Samuele Soraggi
Jose Alejandro Romero Herrera Jose Alejandro Romero Herrera
Single-cell sequencing RNA-seq Transcriptomics Python R
Days since last push
35
License
apache-2.0
Short course on Research Data Management for NGS data
Contributors
Alba Refoyo Martínez Alba Refoyo Martínez
Jose Alejandro Romero Herrera Jose Alejandro Romero Herrera
Data management FAIR data Next generation sequencing
Days since last push
695
License
cc-by-sa-4.0

About

Glittr.org is a curated list of educational material for the computational life sciences.

All material is:

  • In a GitHub or GitLab repository
  • Free to use
  • Written in markdown or similar

If you want to cite or know more about Glittr.org, check out our paper in PLOS ONE!

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There are no checks on quality. In case there is no license associated with the repository, copyright belongs to the author, and you cannot copy or modify it for any reason other than personal use.

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Patricia Palagi
Yann Haefliger

Data last updated: 2026-10-02 13:18:16

Swiss Institute of Bioinformatics

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