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53 Repositories
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Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Using High-Performance Computing Systems
Contributors
ocaisa
Andrew Reid
Mike Renfro
Jeff Stafford
Sabry Razick
High performance computing
Days since last push
3
License
other
Intermediate Research Software Development Skills (Python)
Contributors
Aleksandra Nenadic
Steve Crouch
Thomas Kiley
Matthew
James Graham
Python
Days since last push
3
License
other
Python Testing and Continuous Integration
Contributors
Greg Wilson
Katy Huff
François Michonneau
Liam_Thompson
Andy Boughton
Python
Days since last push
1524
License
other
Reproducible Computational Environments using Containers
Contributors
Raniere Silva
François Michonneau
Greg Wilson
Sarah Stevens
Christina K.
Containerization
Docker
Days since last push
3
License
other
Introduction to Conda for (Data) Scientists
Contributors
Raniere Silva
David R. Pugh
Greg Wilson
François Michonneau
Maxim Belkin
Python
Reproducibility
Days since last push
1309
License
other
fMRI Imaging Analysis
Contributors
Jerry Jeyachandra
Michael Joseph
Jon Haitz Legarreta Gorroño
Toby Hodges
Mike Schmidt
Image analysis
Days since last push
3
License
other
Structural Neuroimaging Analysis in Python
Contributors
Nikhil Bhagwat
Swapna Premasiri
Jon Haitz Legarreta Gorroño
Michael
Jean-Baptiste Poline
Image analysis
Days since last push
3
License
other
Workflow management with Nextflow and nf-core
Contributors
Graeme Grimes
Mahesh Binzer-Panchal
Robert (Bob) Turner
Nurlan Kerimov
Erik Fasterius
Workflows
Nextflow
Days since last push
619
License
other
A Carpentry style lesson on machine learning with Python and scikit-learn.
Contributors
Colin Sauze
Mike Laverick
NidhiGowdra
Christopher Endemann
Tom Saunders
Machine learning
Statistics
Days since last push
3
License
other
Extra Unix Shell Material
Contributors
vuw-ecs-kevin
Christina K.
Andy Boughton
François Michonneau
Abby Cabunoc Mayes
Unix/Linux
Days since last push
893
License
other
GPU Programming with Python and CUDA.
Contributors
Alessio Sclocco
Hanno Spreeuw
Giordano Lipari
Sven van der Burg
Alex Coleman
High performance computing
Machine learning
Artificial intelligence
Days since last push
3
License
other
Bioconductor data science introduction
Contributors
Laurent Gatto
Kozo Nishida
Jenny Drnevich
Zhian N. Kamvar
Charlotte Soneson
R
Days since last push
3
License
other
Introduction to MRI and BIDS
Contributors
Michael Joseph
Jon Haitz Legarreta Gorroño
Toby Hodges
Erin W Dickie
tigrlab-bot
Image analysis
Days since last push
3
License
other
Introduction to dMRI
Contributors
Jon Haitz Legarreta Gorroño
Michael Joseph
Jason Kai
Toby Hodges
ostanley
Image analysis
Days since last push
3
License
other
Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
Contributors
Charlotte Soneson
Jenny Drnevich
Zhian N. Kamvar
Zuguang Gu
Givanna Putri
Transcriptomics
RNA-seq
R
Days since last push
10
License
other
Materials for a workshop introducing machine learning to biologists
Contributors
Anthony Gitter
Milica
Raniere Silva
Fangzhou Mu
Greg Wilson
Machine learning
Days since last push
560
License
other
Good Enough Practices in Scientific Computing
Contributors
Edward Wallace
Tomasz Zielinski
Allen Lee
Emma Wilson
Zhian N. Kamvar
Reproducibility
Data management
Version control
Days since last push
3
License
other
Packaging and Publishing with Python
Contributors
Vini Salazar
Sarah Brown
Callum Rollo
Toby Hodges
Ariel Miki Abraham
Python
Days since last push
3
License
other
Introduction to Snakemake for Bioinformatics
Contributors
Tim Booth
Lex Nederbragt
Ezra Herman
John Blischak
Zhian N. Kamvar
Workflows
Snakemake
Days since last push
3
License
other
A lesson exploring the Julia language
Contributors
Simon Christ
Mosè Giordano
Gus Pendleton
Toby Hodges
Julia
Days since last push
3
License
other
Building Better Research Software
Contributors
Aleksandra Nenadic
Sarah Stevens
Sarah Gibson
Toby Hodges
Aman Goel
Reproducibility
FAIR data
Days since last push
3
License
other
Introduction to the Bioconductor project
Contributors
Kevin Rue-Albrecht
Zhian N. Kamvar
Milan Malfait
Doug Joubert
Charlotte Soneson
R
Days since last push
350
License
other
Introduction to Reproducible Publications with Quarto
Contributors
Renata Curty
Torin White
actions-user
Ian Lessing
Julien Brun
R
Version control
Rmarkdown
Reproducibility
Days since last push
3
License
other
Introduction to Reproducible Publications with Quarto
Contributors
Renata Curty
Torin White
actions-user
Ian Lessing
Julien Brun
Reproducibility
Quarto
Days since last push
3
License
other
Building Websites with Jekyll & GitHub Pages.
Contributors
Toby Hodges
Aleksandra Nenadic
Raniere Silva
François Michonneau
Maxim Belkin
Reproducibility
FAIR data
Days since last push
1092
License
other
Topics