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14 Repositories
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Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Contributors
Helena
Saskia Hiltemann
Bérénice Batut
Björn Grüning
Wendi Bacon
Galaxy
General
Genomics
Next generation sequencing
Transcriptomics
RNA-seq
Single-cell sequencing
Variant analysis
ATAC-seq
Comparative genomics
ChIP-seq
Epigenetics
Genome annotation
Genome assembly
Metagenomics
Microbiology
Long read sequencing
Metabolomics
Proteomics
Data management
FAIR data
Reproducibility
Data science
Statistics
Machine learning
Snakemake
R
Python
Unix/Linux
Version control
Days since last push
0
License
mit
Contributors
Ryan Wick
Marc Trunjer Kusk Nielsen
Long read sequencing
Genome assembly
Days since last push
69
License
-
Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data
gpl-3.0
Contributors
Tim Kahlke
Sebastian Jaenicke
Long read sequencing
Days since last push
436
License
gpl-3.0
A course on genomics and bioinformatics from WashU
Contributors
Chris Miller
Jason Walker
John Garza
jennymckenzie
Susanna Kiwala
Genomics
Next generation sequencing
RNA-seq
Variant analysis
Data visualization
Long read sequencing
Single-cell sequencing
Days since last push
0
License
-
de.NBI Nanopore Training Course
Contributors
nkleinbo
Sebastian Juenemann
asczyrba
janbaasner
Genomics
Long read sequencing
Metagenomics
Genome assembly
Days since last push
475
License
-
SIB course that introduces analysis of NGS data
cc-by-4.0
Contributors
Geert van Geest
Deepak Tanwar
Patricia Palagi
fburdet
Flavio Lombardo
Next generation sequencing
Long read sequencing
Unix/Linux
Days since last push
172
License
cc-by-4.0
Contributors
Geert van Geest
Jcarlevaro
Long read sequencing
Days since last push
218
License
other
Contributors
Nadège Guiglielmoni
linelle
Genome assembly
Genome annotation
Long read sequencing
Days since last push
384
License
-
Contributors
Benedicte Garmann-Aarhus
Ole Kristian Tørresen
Genome assembly
Next generation sequencing
Long read sequencing
Days since last push
1283
License
gpl-3.0
Main website for shared ebook materials
Contributors
Jason Williams
Long read sequencing
Genomics
Days since last push
381
License
-
Contains resources for the Genomics and Long Reads Education developed by the Chakraborty Lab
gpl-3.0
Contributors
Mahul Chakraborty
Alex Samano
Genomics
Next generation sequencing
Long read sequencing
Genome assembly
Days since last push
210
License
gpl-3.0
Contributors
Jacques Dainat
Hadrien Gourlé
jhayer
dependabot-support
General
Unix/Linux
Genomics
Genome assembly
Genome annotation
Long read sequencing
R
Metagenomics
Comparative genomics
Days since last push
1900
License
cc-by-4.0
Explore the world of genome assembly and gain an understanding of the power and pitfalls of sequencing technologies and assembly techniques.
cc0-1.0
Contributors
jessyjli
Sam Hunter
Hannah Lyman
Matt Settles
Genome assembly
Next generation sequencing
Long read sequencing
Days since last push
1268
License
cc0-1.0
Three day workshop offered in partnership with PacBio. Learn all about the possibilities of full length isoform sequencing from PacBio experts and experienced Core personnel!
bsd-3-clause
Contributors
Matt Settles
Hannah Lyman
najoshi
Long read sequencing
Transcriptomics
Days since last push
1848
License
bsd-3-clause
Topics