Is your (favourite) course not in there? Is a link dead? Did you find a typo?
Any contribution to this list is highly appreciated!
Selected topics (1)
25 Repositories
Page 1 / 1
Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Contributors
Helena
Saskia Hiltemann
Bérénice Batut
Björn Grüning
Wendi Bacon
Galaxy
General
Genomics
Next generation sequencing
Transcriptomics
RNA-seq
Single-cell sequencing
Variant analysis
ATAC-seq
Comparative genomics
ChIP-seq
Epigenetics
Genome annotation
Genome assembly
Metagenomics
Microbiology
Long read sequencing
Metabolomics
Proteomics
Data management
FAIR data
Reproducibility
Data science
Statistics
Machine learning
Snakemake
R
Python
Unix/Linux
Version control
Days since last push
1
License
mit
Contributors
Rick Masonbrink
Arun Seetharam
Andrew Severin
Siva Chudalayandi
Aleksandra E. Badaczewska-Dawid
General
Nextflow
Workflows
Data management
Data visualization
Unix/Linux
ATAC-seq
Comparative genomics
Epigenetics
Genome annotation
Genome assembly
Metagenomics
RNA-seq
Transcriptomics
Variant analysis
Days since last push
96
License
mit
112
Orchestrating Microbiome Analysis
Contributors
Tuomas Borman
Leo Lahti
Giulio Benedetti
Felix Ernst
Artur Sannikov
Metagenomics
Microbiology
Multiomics
R
Days since last push
1
License
-
Analyses in R and Python Using curatedMetagenomicData
cc-by-4.0
Contributors
Levi Waldron
jwokaty
Giacomo Antonello
DavideGolzato
Lucas Schiffer
Metagenomics
Days since last push
352
License
cc-by-4.0
de.NBI Nanopore Training Course
Contributors
nkleinbo
Sebastian Juenemann
asczyrba
janbaasner
Genomics
Long read sequencing
Metagenomics
Genome assembly
Days since last push
509
License
-
Data Processing and Visualization for Metagenomics
Contributors
Nelly Sélem
Raniere Silva
Claudia Zirión MartÃnez
Diego Garfias Gallegos
François Michonneau
Metagenomics
Genomics
Next generation sequencing
Genome assembly
Days since last push
734
License
other
Training material for the workshop Metagenomics data analysis of mixed microbial communities
gpl-3.0
Contributors
Jeferyd Yepes G
Metagenomics
Genomics
Next generation sequencing
Microbiology
Days since last push
531
License
gpl-3.0
Metagenomics Workshop Overview
Contributors
Raniere Silva
Erin Becker
Nelly Sélem
Greg Wilson
François Michonneau
Metagenomics
Genomics
Next generation sequencing
Days since last push
613
License
other
Contributors
Andrea Telatin
Code by Gina
Rebecca
Giacomo Lawrance
Lenin Alberto
General
Metagenomics
Unix/Linux
Data science
Nextflow
Days since last push
15
License
mit
Introduction to R for Metagenomics
Contributors
Raniere Silva
François Michonneau
Maxim Belkin
Nelly Sélem
Andy Boughton
Metagenomics
R
Days since last push
987
License
other
Contributors
Jacques Dainat
Hadrien Gourlé
jhayer
dependabot-support
General
Unix/Linux
Genomics
Genome assembly
Genome annotation
Long read sequencing
R
Metagenomics
Comparative genomics
Days since last push
1934
License
cc-by-4.0
Introduction to the Command Line for Metagenomics
Contributors
Erin Becker
Raniere Silva
Greg Wilson
François Michonneau
Claudia Zirión MartÃnez
Unix/Linux
Metagenomics
Days since last push
736
License
other
Contributors
Ana Popovic
Canadian Bioinformatics Workshops
Zohaib Anwar
Diana
Jacob T. Nearing
Metagenomics
Microbiology
Days since last push
946
License
-
Applied Metagenomics
Contributors
ehj000
The Gulbenkian Training Programme in Bioinformatics
Metagenomics
Next generation sequencing
Genomics
Days since last push
1483
License
other
GBIF training courses
Contributors
GBIF Crowdin
Laura Russell
GBIF Jenkins Bot
Marie Grosjean
Matt Blissett
Genomics
Population genetics
FAIR data
Metagenomics
Days since last push
4
License
-
Project Organization and Management for Metagenomics
Contributors
Claudia Zirión MartÃnez
Nelly Sélem
Aaron E. Jaime
J. Abel Lovaco
AbrahamAvelar
Metagenomics
Data management
FAIR data
Reproducibility
Days since last push
799
License
other
benchdamic's workshop
Contributors
Matteo Calgaro
Metagenomics
Microbiology
Days since last push
470
License
other
Contributors
kevmu
Canadian Bioinformatics Workshops
Robyn Wright
Heather Gibling
Ryan Chieu
Metagenomics
Microbiology
Days since last push
946
License
-
Contributors
zhibinlu
Ana Popovic
William Hsiao
Irina Utkina
Diana
Metagenomics
Microbiology
Days since last push
1427
License
-
Contributors
Canadian Bioinformatics Workshops
Tony Liu
Ryan
Robyn Wright
Microbiology
Metagenomics
Days since last push
455
License
-
Contributors
Robyn Wright
Canadian Bioinformatics Workshops
Ryan
Microbiology
Metagenomics
Days since last push
362
License
-
Virtual Microbial Genomics Workshop
Contributors
rbeiko
Jimmy Liu
Andrew G. McArthur
Canadian Bioinformatics Workshops
Neha Ratti
Microbiology
Metagenomics
Next generation sequencing
Days since last push
327
License
-
Contributors
Canadian Bioinformatics Workshops
Robyn Wright
Monica Alvaro Fuss
zhibinlu
Microbiology
Metagenomics
Next generation sequencing
Days since last push
886
License
-
Contributors
benfish404
Canadian Bioinformatics Workshops
Robyn Wright
zhibinlu
Metagenomics
Microbiology
Next generation sequencing
Days since last push
886
License
-
Use high-throughput sequencing (HTS) of amplicons to understand the composition and functional content of microbial communities.
cc0-1.0
Contributors
Matt Settles
Hannah Lyman
Metagenomics
Next generation sequencing
R
Days since last push
1994
License
cc0-1.0
Topics