Is your (favourite) course not in there? Is a link dead? Did you find a typo?
Any contribution to this list is highly appreciated!
Selected topics (1)
19 Repositories
Page 1 / 1
Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Contributors
Helena
Saskia Hiltemann
Bérénice Batut
Björn Grüning
Wendi Bacon
Galaxy
General
Genomics
Next generation sequencing
Transcriptomics
RNA-seq
Single-cell sequencing
Variant analysis
ATAC-seq
Comparative genomics
ChIP-seq
Epigenetics
Genome annotation
Genome assembly
Metagenomics
Microbiology
Long read sequencing
Metabolomics
Proteomics
Data management
FAIR data
Reproducibility
Data science
Statistics
Machine learning
Snakemake
R
Python
Unix/Linux
Version control
Days since last push
0
License
mit
Contributors
Rick Masonbrink
Arun Seetharam
Andrew Severin
Siva Chudalayandi
Aleksandra E. Badaczewska-Dawid
General
Nextflow
Workflows
Data management
Data visualization
Unix/Linux
ATAC-seq
Comparative genomics
Epigenetics
Genome annotation
Genome assembly
Metagenomics
RNA-seq
Transcriptomics
Variant analysis
Days since last push
63
License
mit
Contributors
Ryan Wick
Marc Trunjer Kusk Nielsen
Long read sequencing
Genome assembly
Days since last push
70
License
-
Lecture notes/book in progress on computing for conservation genomics
mit
Contributors
Eric C. Anderson
Shyam Saladi
General
Unix/Linux
Version control
R
Genomics
Variant analysis
Genome assembly
Days since last push
977
License
mit
de.NBI Nanopore Training Course
Contributors
nkleinbo
Sebastian Juenemann
asczyrba
janbaasner
Genomics
Long read sequencing
Metagenomics
Genome assembly
Days since last push
475
License
-
17
Computational Pangenomics
Contributors
Andrea Guarracino
The Gulbenkian Training Programme in Bioinformatics
Erik Garrison
Genomics
Comparative genomics
Genome assembly
Days since last push
1583
License
other
Data Processing and Visualization for Metagenomics
Contributors
Nelly Sélem
Raniere Silva
Claudia Zirión Martínez
Diego Garfias Gallegos
François Michonneau
Metagenomics
Genomics
Next generation sequencing
Genome assembly
Days since last push
701
License
other
Contributors
Nadège Guiglielmoni
linelle
Genome assembly
Genome annotation
Long read sequencing
Days since last push
384
License
-
Contributors
Benedicte Garmann-Aarhus
Ole Kristian Tørresen
Genome assembly
Next generation sequencing
Long read sequencing
Days since last push
1283
License
gpl-3.0
In this training course you will find theory and practice material for introducing yourself to the basics of high throughput sequencing data analysis.
gpl-3.0
Contributors
Sarai Varona
Sara Monzón
MiguelJulia
Isabel Cuesta
Víctor López
Next generation sequencing
Unix/Linux
Variant analysis
Genome assembly
Days since last push
476
License
gpl-3.0
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
gpl-3.0
Contributors
Sara Monzón
Sarai Varona
MiguelJulia
Pedro J. Sola
Isabel Cuesta
Next generation sequencing
Microbiology
Nextflow
Singularity
Unix/Linux
Genome assembly
Genome annotation
Variant analysis
Days since last push
700
License
gpl-3.0
Contains resources for the Genomics and Long Reads Education developed by the Chakraborty Lab
gpl-3.0
Contributors
Mahul Chakraborty
Alex Samano
Genomics
Next generation sequencing
Long read sequencing
Genome assembly
Days since last push
210
License
gpl-3.0
Contributors
Jacques Dainat
Hadrien Gourlé
jhayer
dependabot-support
General
Unix/Linux
Genomics
Genome assembly
Genome annotation
Long read sequencing
R
Metagenomics
Comparative genomics
Days since last push
1901
License
cc-by-4.0
Explore the world of genome assembly and gain an understanding of the power and pitfalls of sequencing technologies and assembly techniques.
cc0-1.0
Contributors
jessyjli
Sam Hunter
Hannah Lyman
Matt Settles
Genome assembly
Next generation sequencing
Long read sequencing
Days since last push
1269
License
cc0-1.0
Contributors
Ole Kristian Tørresen
Benedicte Garmann-Aarhus
Thu-Hien To
Helle Tessand Baalsrud
Lars Grønvold
Genome assembly
Genome annotation
Comparative genomics
Days since last push
189
License
cc-by-4.0
Genomics Quality Control with BUSCO - Genome Mode
cc-by-4.0
Contributors
Rob Waterhouse
Genome assembly
Genomics
Days since last push
311
License
cc-by-4.0
Course webpage for BGE HiC course digitalization
Contributors
KS
Genome assembly
Genomics
Days since last push
398
License
-
Biodiversity Genomics Academy 2023: BUSCO - from QC to gene prediction and phylogenomics
mit
Contributors
Rob Waterhouse
Sujai Kumar
Genome assembly
Genomics
Days since last push
421
License
mit
In this training course you will find theory and practice material for introducing yourself to wgs analysis for foodborne bacteria
Contributors
Sarai Varona
Isabel Cuesta
Sara Monzón
Microbiology
Next generation sequencing
Galaxy
Genome assembly
Genome annotation
Variant analysis
Epidemiology
Days since last push
1423
License
-
Topics