Is your (favourite) course not in there? Is a link dead? Did you find a typo?
Any contribution to this list is highly appreciated!
Selected topics (1)
10 Repositories
Page 1 / 1
Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Contributors
Helena
Saskia Hiltemann
Bérénice Batut
Björn Grüning
Wendi Bacon
Galaxy
General
Genomics
Next generation sequencing
Transcriptomics
RNA-seq
Single-cell sequencing
Variant analysis
ATAC-seq
Comparative genomics
ChIP-seq
Epigenetics
Genome annotation
Genome assembly
Metagenomics
Microbiology
Long read sequencing
Metabolomics
Proteomics
Data management
FAIR data
Reproducibility
Data science
Statistics
Machine learning
Snakemake
R
Python
Unix/Linux
Version control
Days since last push
1
License
mit
Python Programming for Biologists
Contributors
R. Burke Squires
Python
Machine learning
Data visualization
Workflows
Snakemake
Reproducibility
Days since last push
272
License
-
Materials for the Training and Engagement Website
Contributors
Marisa Lim
Rayna M Harris
Abhijna Parigi
Jeremy Walter
Saranya Canchi
General
Cloud computing
RNA-seq
Python
Unix/Linux
Snakemake
Days since last push
1026
License
other
Introduction to Snakemake for Bioinformatics
Contributors
Tim Booth
Ezra Herman
Lex Nederbragt
John Blischak
Zhian N. Kamvar
Workflows
Snakemake
Days since last push
1
License
other
Course website "Introduction to Containers and Snakemake for Reproducible Research"
cc-by-4.0
Contributors
Antonin Thiébaut
Geert van Geest
rriupu
Workflows
Containerization
Snakemake
Singularity
Docker
Days since last push
112
License
cc-by-4.0
Démonstration d’outils de bioinfo dans le cadre d’un projet
Contributors
Thomas Denecker
clairetn
General
Reproducibility
Containerization
Snakemake
Next generation sequencing
Transcriptomics
RNA-seq
Days since last push
1938
License
other
One-day Snakemake workshop.
Contributors
DC23
Raniere Silva
Greg Wilson
François Michonneau
Jeff Stafford
Workflows
Snakemake
Days since last push
1155
License
other
Repository for the workshop "Introduction to Snakemake" @ SIB-Days 2022
gpl-3.0
Contributors
Romain Feron
Amina Echchiki
Jon Fuller
Workflows
Snakemake
Days since last push
1603
License
gpl-3.0
Contributors
ocaisa
Andrew Reid
Renato Alves
Trevor Keller
Toby Hodges
Snakemake
Workflows
High performance computing
Days since last push
106
License
other
Contributors
Edmund Miller
Salehkarim21
hxf190002
muneeryaqub
syamauchi2000
Workflows
Snakemake
Reproducibility
Unix/Linux
ATAC-seq
ChIP-seq
Epigenetics
Genomics
RNA-seq
Galaxy
Days since last push
826
License
-
Topics