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Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Course website "Docker and Singularity for reproducible research: getting started with containers"
cc-by-4.0
Contributors
Geert van Geest
Antonin Thiébaut
Yann Haefliger
Jcarlevaro
rriupu
Containerization
Docker
Singularity
Days since last push
111
License
cc-by-4.0
An introduction to singularity
Contributors
Raniere Silva
François Michonneau
Greg Wilson
Maxim Belkin
Jeremy Cohen
Containerization
Singularity
Days since last push
668
License
other
Course website "Introduction to Containers and Snakemake for Reproducible Research"
cc-by-4.0
Contributors
Antonin Thiébaut
Geert van Geest
rriupu
Workflows
Containerization
Snakemake
Singularity
Docker
Days since last push
78
License
cc-by-4.0
Materials for the workshop on containers
cc-by-4.0
Contributors
Alexander
Bruna Piereck
Alexander Botzki
Tuur Muyldermans
Containerization
Docker
Singularity
Days since last push
45
License
cc-by-4.0
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
gpl-3.0
Contributors
Sara Monzón
Sarai Varona
MiguelJulia
Pedro J. Sola
Isabel Cuesta
Next generation sequencing
Microbiology
Nextflow
Singularity
Unix/Linux
Genome assembly
Genome annotation
Variant analysis
Days since last push
700
License
gpl-3.0
https://permedcoe.github.io/mpi-in-container
Contributors
Henrik Nortamo
Containerization
Docker
Singularity
High performance computing
Days since last push
1717
License
other
Introduction to using Docker and Singularity containers in CMS(SW)
Contributors
Kevin Pedro
Clemens Lange
Containerization
Docker
Singularity
Days since last push
436
License
other
Contributors
Edmund Miller
Salehkarim21
hxf190002
syamauchi2000
muneeryaqub
Genomics
High performance computing
Nextflow
Reproducibility
Containerization
Version control
Singularity
Epigenetics
ChIP-seq
Unix/Linux
RNA-seq
Variant analysis
Julia
Days since last push
907
License
-
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