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17 Repositories
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Repository
Owner
Contributors
Topics
Stargazers
Days since last push
Nextflow training material
Contributors
Marcel Ribeiro-Dantas
Chris Hakkaart
Chris Wyatt
Phil Ewels
Jonathan Manning
Workflows
Nextflow
Days since last push
3
License
other
Contributors
Rick Masonbrink
Arun Seetharam
Andrew Severin
Siva Chudalayandi
Aleksandra E. Badaczewska-Dawid
General
Nextflow
Workflows
Data management
Data visualization
Unix/Linux
ATAC-seq
Comparative genomics
Epigenetics
Genome annotation
Genome assembly
Metagenomics
RNA-seq
Transcriptomics
Variant analysis
Days since last push
63
License
mit
Workflow management with Nextflow and nf-core
Contributors
Graeme Grimes
Mahesh Binzer-Panchal
Robert (Bob) Turner
Nurlan Kerimov
Erik Fasterius
Workflows
Nextflow
Days since last push
619
License
other
Nextflow workshop materials November 2025
Contributors
Kobe Lavaerts
Tuur Muyldermans
Nicolas Vannieuwkerke
Alexander
Kris Davie
Workflows
Nextflow
Days since last push
47
License
other
Contributors
Andrea Telatin
Code by Gina
Rebecca
Giacomo Lawrance
Lenin Alberto
General
Metagenomics
Unix/Linux
Data science
Nextflow
Days since last push
169
License
mit
Slow-paced containers and Nextflow course for beginners.
Contributors
Toni Hermoso Pulido
Jose Espinosa-Carrasco
Luca Cozzuto
Workflows
Nextflow
Days since last push
1577
License
-
BovReg Nextflow workshop and hackathon organized by the CRG on 17-20 November 2020
apache-2.0
Contributors
Jose Espinosa-Carrasco
Workflows
Nextflow
Days since last push
989
License
apache-2.0
Nextflow Tutorial - Variant Calling Edition
Contributors
Sateesh_Peri
Workflows
Nextflow
Variant analysis
Days since last push
957
License
-
ELIXIR VIB-CRG courses on containers (Docker + Singularity) and Nextflow.
Contributors
Toni Hermoso Pulido
Julia Ponomarenko
Luca Cozzuto
Sarah Bonnin
Tuur Muyldermans
Workflows
Nextflow
Days since last push
1805
License
-
In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.
gpl-3.0
Contributors
Sara Monzón
Sarai Varona
MiguelJulia
Pedro J. Sola
Isabel Cuesta
Next generation sequencing
Microbiology
Nextflow
Singularity
Unix/Linux
Genome assembly
Genome annotation
Variant analysis
Days since last push
700
License
gpl-3.0
Training materials for a Nextflow beginners workshop 2024
Contributors
Fred Jaya
Georgie Samaha
Chris Hakkaart
Patrick Capon
Nextflow
Days since last push
707
License
-
Nextflow course 2021
Contributors
Luca Cozzuto
Julia Ponomarenko
Toni Hermoso Pulido
Diana Marek
Workflows
Nextflow
Days since last push
1759
License
-
Contributors
Edmund Miller
Salehkarim21
muneeryaqub
syamauchi2000
hxf190002
Genomics
High performance computing
Nextflow
Reproducibility
Containerization
Version control
Singularity
Epigenetics
ChIP-seq
Unix/Linux
RNA-seq
Variant analysis
Julia
Days since last push
907
License
-
Contributors
Georgie Samaha
Chris Hakkaart
calizilla
Gordon McDonald
Nextflow
Workflows
Days since last push
1182
License
mit
Contributors
Nandan Deshpande
Georgie Samaha
RNA-seq
Nextflow
R
Days since last push
1071
License
mit
Workflow management with Nextflow and nf-core
Contributors
Graeme Grimes
Mahesh Binzer-Panchal
Nurlan Kerimov
Toby Hodges
Nextflow
Days since last push
881
License
other
Contributors
Matt Eldridge
Richard Bowers
Workflows
Nextflow
Days since last push
1813
License
mit
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