Selected topics (1)

16 Repositories

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GPU Programming with Julia - course at the Swiss National Supercomputing Centre (CSCS), ETH Zurich
Contributors
Samuel Omlin Samuel Omlin
Julia High performance computing
Days since last push
1529
License
bsd-3-clause
Using High-Performance Computing Systems
Contributors
ocaisa ocaisa
Andrew Reid Andrew Reid
Mike Renfro Mike Renfro
Jeff Stafford Jeff Stafford
Sabry Razick Sabry Razick
+ 44 more
High performance computing
Days since last push
1
License
other
Contributors
sjm446 sjm446
mhuguesaws mhuguesaws
Amit Tyagi Amit Tyagi
Anh Tran Anh Tran
Pierre-Yves Pierre-Yves
+ 14 more
Cloud computing High performance computing
Days since last push
317
License
other
GPU Programming with Python and CUDA.
Contributors
Alessio Sclocco Alessio Sclocco
Hanno Spreeuw Hanno Spreeuw
Giordano Lipari Giordano Lipari
Sven van der Burg Sven van der Burg
Alex Coleman Alex Coleman
+ 10 more
High performance computing Machine learning Artificial intelligence
Days since last push
4
License
other
Practical course on running jobs on a HPC
Contributors
Hugo Tavares Hugo Tavares
Raquel Manzano Raquel Manzano
João Pedro João Pedro
High performance computing
Days since last push
15
License
other
Free, open-source book on making R code faster: profiling, parallel computing, running R on Slurm clusters, and C++ with Rcpp. In English and Spanish.
Contributors
George G. Vega Yon George G. Vega Yon
actions-user actions-user
High performance computing R
Days since last push
36
License
cc-by-4.0
Remote computing workshops in August 2021
Contributors
C. Titus Brown C. Titus Brown
Marisa Lim Marisa Lim
Abhijna Parigi Abhijna Parigi
Saranya Canchi Saranya Canchi
Jeremy Walter Jeremy Walter
High performance computing
Days since last push
1877
License
-
This course is designed to help investigators understand more about computing basics, as well as familiarize researchers with various computing platform options.
Contributors
Carrie Wright Carrie Wright
jhudsl-robot jhudsl-robot
actions-user actions-user
Candace Savonen Candace Savonen
Kate Isaac Kate Isaac
+ 1 more
High performance computing Cloud computing
Days since last push
27
License
cc-by-4.0
https://permedcoe.github.io/mpi-in-container
Contributors
Henrik Nortamo Henrik Nortamo
Containerization Docker Singularity High performance computing
Days since last push
1746
License
other
In this training course you will find theory and practice material for introducing yourself to the basics of high-performance computing (HPC) environment.
Contributors
Sara Monzón Sara Monzón
Sarai Varona Sarai Varona
Pablo Mata Pablo Mata
Daniel VM Daniel VM
High performance computing
Days since last push
8
License
gpl-3.0
Bioinformatics, Handy and Practical
Contributors
David Paleček David Paleček
TaniaAires TaniaAires
Isabel Duarte Isabel Duarte
Next generation sequencing High performance computing Transcriptomics Genomics RNA-seq
Days since last push
270
License
mit
Contributors
Edmund Miller Edmund Miller
Salehkarim21 Salehkarim21
muneeryaqub muneeryaqub
syamauchi2000 syamauchi2000
hxf190002 hxf190002
Genomics High performance computing Nextflow Reproducibility Containerization Version control Singularity Epigenetics ChIP-seq Unix/Linux RNA-seq Variant analysis Julia
Days since last push
936
License
-
https://permedcoe.github.io/cluster-tutorial/
Contributors
Jesse Harrison Jesse Harrison
High performance computing
Days since last push
1709
License
other
Contributors
Benjamin Pavie Benjamin Pavie
Bruna Piereck Bruna Piereck
Tatiana Woller Tatiana Woller
Boris Depoortere Boris Depoortere
High performance computing
Days since last push
30
License
-
Contributors
ocaisa ocaisa
Andrew Reid Andrew Reid
Renato Alves Renato Alves
Trevor Keller Trevor Keller
Toby Hodges Toby Hodges
Snakemake Workflows High performance computing
Days since last push
102
License
other
Contributors
Andrew Reid Andrew Reid
Mike Renfro Mike Renfro
Jeff Stafford Jeff Stafford
Sabry Razick Sabry Razick
Andy Turner Andy Turner
+ 39 more
High performance computing
Days since last push
102
License
other

About

Glittr.org is a curated list of educational material for the computational life sciences.

All material is:

  • In a GitHub or GitLab repository
  • Free to use
  • Written in markdown or similar

If you want to cite or know more about Glittr.org, check out our paper in PLOS ONE!

NOTE: This list of courses is selected only based on the above criteria.
There are no checks on quality. In case there is no license associated with the repository, copyright belongs to the author, and you cannot copy or modify it for any reason other than personal use.

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Developed, maintained and curated by:
Geert van Geest
Patricia Palagi
Yann Haefliger

Data last updated: 2026-10-31 01:17:50

Swiss Institute of Bioinformatics

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