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21 Repositories
Page 1 / 1
Repository
Owner
Contributors
Topics
Stargazers
Days since last push
117
"Orchestrating Spatial Transcriptomics Analysis with Bioconductor" (OSTA) online book
Contributors
Helena L. Crowell
Lukas Weber
Artür Manukyan
Mark Robinson
Estella Yixing Dong
Spatial transcriptomics
R
Days since last push
6
License
-
Contributors
Rasool Saghaleyni
Geert van Geest
Francesca Drummer
geogav
ahmedmahfouz
Spatial transcriptomics
Transcriptomics
Image analysis
Days since last push
563
License
cc-by-4.0
Based on their genomic data types and goals, this course will help learners find educational resources and tools to help them process and interpret data.
cc-by-4.0
Contributors
Candace Savonen
jhudsl-robot
cmills2
Carrie Wright
Kate Isaac
Genomics
Next generation sequencing
Transcriptomics
RNA-seq
Single-cell sequencing
Variant analysis
ATAC-seq
Spatial transcriptomics
Genome annotation
Epigenetics
ChIP-seq
Days since last push
23
License
cc-by-4.0
Contributors
Christophe Avenel
Eduard Chelebian
sebastiantiesmeyer
Anna Schaar
sergiomarco25
Spatial transcriptomics
Python
Transcriptomics
RNA-seq
Days since last push
1117
License
-
Pattern Analysis of SpaTial omics datA
Contributors
Martin Emons
Samuel Gunz
Mark Robinson
CATALYST-project
Izaskun Mallona
Statistics
R
Spatial transcriptomics
Days since last push
497
License
-
Contributors
juexinwang
Machine learning
Artificial intelligence
Single-cell sequencing
Spatial transcriptomics
Days since last push
833
License
-
GeoMX analysis workflow
Contributors
Ning Liu
Ahmed Mohamed
Spatial transcriptomics
Days since last push
1076
License
other
Introduction to Spatial Transcriptomics Data Analysis
cc-by-4.0
Contributors
Deepak Tanwar
Julien Roux
Jcarlevaro
Martin Emons
Peiying Cai
Spatial transcriptomics
Image analysis
Data visualization
RNA-seq
Transcriptomics
Days since last push
130
License
cc-by-4.0
Contributors
HeidiLischer
Geert van Geest
Spatial transcriptomics
Transcriptomics
R
Days since last push
5
License
cc-by-4.0
Contributors
ahmedmahfouz
Benedetta Manzato
Willem
Claudio Novella Rausell
mbaardwijk
Spatial transcriptomics
Days since last push
326
License
mit
Introduction to Sequencing-based Spatial Transcriptomics Data Analysis
cc-by-4.0
Contributors
Deepak Tanwar
Julien Roux
Jcarlevaro
Peiying Cai
Martin Emons
Spatial transcriptomics
Next generation sequencing
Transcriptomics
RNA-seq
Days since last push
281
License
cc-by-4.0
Contributors
Cristina Cheroni
Davide Castaldi
Gaja Matassa
Alessia Valenti
Benedetta Manzato
Transcriptomics
Single-cell sequencing
Spatial transcriptomics
RNA-seq
Days since last push
690
License
mit
Contributors
Lukas Weber
dario righelli
CATALYST-project
Spatial transcriptomics
R
Transcriptomics
Days since last push
1893
License
other
Contributors
Simon Cockell
Spatial transcriptomics
Transcriptomics
Next generation sequencing
Days since last push
1127
License
cc-by-4.0
Contributors
Ellis Patrick
Alex Qin
Farhan Ameen
Spatial transcriptomics
Transcriptomics
R
Days since last push
1163
License
other
Contributors
Estella Yixing Dong
Spatial transcriptomics
R
Days since last push
1066
License
-
Contributors
Estella Yixing Dong
Spatial transcriptomics
R
Days since last push
1066
License
-
Redirect link to OSTA book
Contributors
Lukas Weber
Spatial transcriptomics
Next generation sequencing
Transcriptomics
R
Days since last push
629
License
-
Contributors
Canadian Bioinformatics Workshops
Spatial transcriptomics
Days since last push
351
License
-
Contributors
Canadian Bioinformatics Workshops
zhibinlu
Spatial transcriptomics
Days since last push
351
License
-
An introduction to spatial transcriptomics using 10x Genomics Visium datat.
gpl-3.0
Contributors
Hannah Lyman
Spatial transcriptomics
R
RNA-seq
Transcriptomics
Days since last push
1408
License
gpl-3.0
Topics