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30 Repositories
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Repository
Author
Topics
Stargazers
Days since last push
License
SIB course on single cell transcriptomics by mostly using the Seurat pipeline
RNA-seq
Single-cell sequencing
Transcriptomics
Days since last push
35
License
cc-by-4.0
repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
Python
Days since last push
38
License
cc-by-4.0
Python
Days since last push
128
License
cc-by-4.0
repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
R
Days since last push
72
License
cc-by-4.0
Course website "Docker and Singularity for reproducible research: getting started with containers"
Containerization
Docker
Singularity
Days since last push
132
License
cc-by-4.0
GitHub for the SIB courses NGS - Genome variant analysis
Next generation sequencing
Variant analysis
Days since last push
57
License
cc-by-4.0
Machine learning
Statistics
Days since last push
14
License
cc-by-4.0
SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
RNA-seq
Single-cell sequencing
Transcriptomics
Days since last push
949
License
-
Statistics
Days since last push
128
License
cc-by-4.0
Material for lectures and exercises of the SIB course "Advanced topics in single-cell transcriptomics" (May 2020)
RNA-seq
Single-cell sequencing
Transcriptomics
Days since last push
1427
License
-
Machine learning
Statistics
Days since last push
128
License
cc-by-4.0
Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.
RNA-seq
Transcriptomics
Pathways and Networks
Days since last push
128
License
cc-by-4.0
SIB course that introduces analysis of NGS data
Genomics
Next generation sequencing
Days since last push
8
License
cc-by-4.0
material for the "Introduction to Statistics with Python" SIB-training course
Python
Statistics
Days since last push
128
License
cc-by-4.0
Webpage for SIB's advanced statistics course
Statistics
Days since last push
231
License
other
This repository contains training material for querying SIB (Swiss Institute of Bioinformatics) resources with SPARQL.
Data management
Days since last push
48
License
-
Long read sequencing
Days since last push
50
License
other
Course website "Introduction to Containers and Snakemake for Reproducible Research"
Containerization
Docker
Singularity
Snakemake
Workflows
Days since last push
148
License
cc-by-sa-4.0
Course material for Enrichment analysis course by SIB
R
Enrichment analysis
Days since last push
45
License
other
SIB First Steps with UNIX course
Unix/Linux
Days since last push
100
License
-
Repository for the workshop "Introduction to Snakemake" @ SIB-Days 2022
Snakemake
Workflows
Days since last push
680
License
gpl-3.0
pratrical crash course on pytorch by reproducing some published biology-related deep-learning models
Python
Machine learning
Days since last push
128
License
cc-by-4.0
R
Multiomics
Statistics
Days since last push
41
License
other
R
Statistics
Days since last push
87
License
other
Nextflow course 2021
Nextflow
Workflows
Days since last push
870
License
-
Topics