18 Repositories

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A collection of Galaxy-related training material
Author
Galaxy Project
Galaxy General Genomics Next generation sequencing Transcriptomics RNA-seq Single-cell sequencing Variant analysis ATAC-seq Comparative genomics ChIP-seq Epigenetics Genome annotation Genome assembly Metagenomics Microbiology Long read sequencing Metabolomics Proteomics Data management FAIR data Reproducibility Data science Statistics Machine learning Snakemake R Python Unix/Linux Version control
Days since last push
0
License
mit
Bioinformatics Workbook repository
Author
Genome Informatics Facility
General Nextflow Workflows Data management Data visualization Unix/Linux ATAC-seq Comparative genomics Epigenetics Genome annotation Genome assembly Metagenomics RNA-seq Transcriptomics Variant analysis
Days since last push
4
License
mit
A course on genomics and bioinformatics from WU
Author
The McDonnell Genome Institute
Genomics Next generation sequencing RNA-seq Single-cell sequencing Variant analysis ChIP-seq ATAC-seq Epigenetics Long read sequencing Metagenomics R Python Unix/Linux Data visualization Docker Workflows
Days since last push
12
License
-
Analyses in R and Python Using curatedMetagenomicData
Author
Waldron Lab at the CUNY SPH
Metagenomics
Days since last push
731
License
cc-by-4.0
de.NBI Nanopore Training Course
Author
Computational Metagenomics
Genomics Long read sequencing Metagenomics Genome assembly
Days since last push
745
License
-
Data Processing and Visualization for Metagenomics
Author
The Carpentries Lab
Metagenomics Genomics Next generation sequencing Genome assembly
Days since last push
2
License
other
Jekyll Template - Mediumish
Author
Andrea Telatin
General Metagenomics Unix/Linux Data science Nextflow
Days since last push
312
License
mit
Metagenomics Workshop Overview
Author
The Carpentries Lab
Metagenomics Genomics Next generation sequencing
Days since last push
108
License
other
Introduction to R for Metagenomics
Author
The Carpentries Lab
Metagenomics R
Days since last push
241
License
other
Author
Canadian Bioinformatics Workshops
Metagenomics Microbiology
Days since last push
201
License
-
Introduction to the Command Line for Metagenomics
Author
The Carpentries Lab
Unix/Linux Metagenomics
Days since last push
241
License
other
Project Organization and Management for Metagenomics
Author
The Carpentries Lab
Metagenomics Data management FAIR data Reproducibility
Days since last push
54
License
other
benchdamic's workshop
Author
Matteo Calgaro
Metagenomics Microbiology
Days since last push
207
License
other
Author
bioinformatics.ca
Metagenomics Microbiology
Days since last push
201
License
-
Author
bioinformatics.ca
Metagenomics Microbiology
Days since last push
682
License
-
Author
bioinformatics.ca
Microbiology Metagenomics Next generation sequencing
Days since last push
141
License
-
Author
bioinformatics.ca
Metagenomics Microbiology Next generation sequencing
Days since last push
140
License
-
Use high-throughput sequencing (HTS) of amplicons to understand the composition and functional content of microbial communities.
Author
UC Davis Bioinformatics Core Training Page
Metagenomics Next generation sequencing R
Days since last push
1248
License
cc0-1.0

About

Glittr.org is a curated list of educational material for the computational life sciences.

All material is:

  • In a GitHub or GitLab repository
  • Free to use
  • Written in markdown or similar

If you want to cite or know more about Glittr.org, check out our preprint at bioRxiv!

NOTE: This list of courses is selected only based on the above criteria.
There are no checks on quality. In case there is no license associated with the repository, copyright belongs to the author, and you cannot copy or modify it for any reason other than personal use.

Terms of use

Developed, maintained and curated by:
Geert van Geest
Patricia Palagi
Yann Haefliger

Data last updated: 2024-10-19 13:06:45

Swiss Institute of Bioinformatics

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